Estimating Stream Diversity 2.0

Estimating Stream Diversity 2.0 preview image

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Default-person Bella Fassett (Author)

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breed [seine seines]
breed [critter critters]
globals [time StTime catchem s1 s2 s3 s4 s5 s6 s7 s8 s9 s10 s11 s12 s13 s14 s15 s16 sTot]

to startup
  setup
end 

to setup
  ;; (for this model to work with NetLogo's new plotting features,
  ;; __clear-all-and-reset-ticks should be replaced with clear-all at
  ;; the beginning of your setup procedure and reset-ticks at the end
  ;; of the procedure.)
  clear-all
  reset-ticks
  setup-patches
  ;import-pcolors "streampic4.jpg"
  set catchem 0
end 

to setup-patches
  ask patches
  [
    set pcolor blue
    if pycor < 25 [set pcolor black]
    if pycor < 23 and pycor > 2 [set pcolor blue + 2]
    if pycor < 23 and pxcor < 11 [set pcolor black]
    if pycor < 23 and pxcor > 88 [set pcolor black]
    if pycor < 23 and (pxcor = 9 or pxcor = 10) [set pcolor black]
    if pycor < 23 and (pxcor = 19 or pxcor = 20) [set pcolor black]
    if pycor < 23 and (pxcor = 29 or pxcor = 30) [set pcolor black]
    if pycor < 23 and (pxcor = 39 or pxcor = 40) [set pcolor black]
    if pycor < 23 and (pxcor = 49 or pxcor = 50) [set pcolor black]
    if pycor < 23 and (pxcor = 59 or pxcor = 60) [set pcolor black]
    if pycor < 23 and (pxcor = 69 or pxcor = 70) [set pcolor black]
    if pycor < 23 and (pxcor = 79 or pxcor = 80) [set pcolor black]
    if pycor < 23 and (pxcor = 89 or pxcor = 90) [set pcolor black]
    if pycor <= 14 and pycor >= 11 [set pcolor black]
  ]
end 

to go
  init-critters
  move-critters
  update
  if catchem = 1 [do-plots]
  if sttime = 1 [set time time + .1]
  if time > sampling-time [close]
  tick
end 

to init-critters
  let x random 100
  if random 100 < 5
  [
    create-critter 1
    [
    set size 3
    set xcor 100 set ycor 45 + random 10 - random 10
    if Pollution = "None"
    [
      if x <= 10  [set shape "caddisfly"]
      if x > 10 and x <= 15 [set shape "mayfly"]
      if x > 15 and x <= 25 [set shape "stonefly"]
      if x > 25 and x <= 30 [set shape "rifflebeetle"]
      if x > 30 and x <= 35 [set shape "waterpenny"]
      if x > 35 and x <= 40 [set shape "gilledsnail"]
      if x > 40 and x <= 45 [set shape "dobsonfly"]
      if x > 45 and x <= 50 [set shape "cranefly"]
      if x > 50 and x <= 55 [set shape "dragonfly"]
      if x > 55 and x <= 60 [set shape "crawdad"]
      if x > 60 and x <= 65 [set shape "sowbug"]
      if x > 65 and x <= 70 [set shape "worm"]
      if x > 70 and x <= 75 [set shape "blackfly"]
      if x > 75 and x <= 80 [set shape "midge"]
      if x > 80 and x <= 85 [set shape "leech"]
      if x > 85  [set shape "lungedsnail"]
    ]
    if Pollution = "Moderate"
    [
      if x <= 0  [set shape "caddisfly"]
      if x > 0 and x <= 2 [set shape "mayfly"]
      if x > 2 and x <= 4 [set shape "stonefly"]
      if x > 4 and x <= 6 [set shape "rifflebeetle"]
      if x > 6 and x <= 8 [set shape "waterpenny"]
      if x > 8 and x <= 10 [set shape "gilledsnail"]
      if x > 10 and x <= 15 [set shape "dobsonfly"]
      if x > 15 and x <= 22 [set shape "cranefly"]
      if x > 22 and x <= 32 [set shape "dragonfly"]
      if x > 32 and x <= 50 [set shape "crawdad"]
      if x > 50 and x <= 60 [set shape "sowbug"]
      if x > 60 and x <= 70 [set shape "worm"]
      if x > 70 and x <= 75 [set shape "blackfly"]
      if x > 75 and x <= 80 [set shape "midge"]
      if x > 80 and x <= 85 [set shape "leech"]
      if x > 85  [set shape "lungedsnail"]
    ]
    if Pollution = "Severe"
    [
      if x <= 0  [set shape "caddisfly"]
      if x > 0 and x <= 0 [set shape "mayfly"]
      if x > 0 and x <= 0 [set shape "stonefly"]
      if x > 0 and x <= 0 [set shape "rifflebeetle"]
      if x > 0 and x <= 0 [set shape "waterpenny"]
      if x > 0 and x <= 0 [set shape "gilledsnail"]
      if x > 0 and x <= 3 [set shape "dobsonfly"]
      if x > 3 and x <= 6 [set shape "cranefly"]
      if x > 6 and x <= 9 [set shape "dragonfly"]
      if x > 9 and x <= 13 [set shape "crawdad"]
      if x > 13 and x <= 20 [set shape "sowbug"]
      if x > 20 and x <= 60 [set shape "worm"]
      if x > 60 and x <= 75 [set shape "blackfly"]
      if x > 75 and x <= 80 [set shape "midge"]
      if x > 80 and x <= 85 [set shape "leech"]
      if x > 85  [set shape "lungedsnail"]
    ]
    ]
   ]
end 

to move-critters
  ask critter
  [

    ifelse [pcolor = black] of patch-ahead 1
    [
      set heading heading + 260 - random 20
      fd .2
      if ycor > 24 [set xcor xcor - .5]
    ]
    [
      set heading heading + random 20 - random 20
      fd .2
      if ycor > 24 [set xcor xcor - .5]
    ]
    if xcor < 1 [die]
    if catchem = 1 and xcor < 50 and xcor > 48 and ycor < 48 and ycor > 34
    [
      if shape = "caddisfly" [setxy 15 19]
      if shape = "mayfly" [setxy 25 19]
      if shape = "stonefly" [setxy 35 19]
      if shape = "rifflebeetle" [setxy 45 19]
      if shape = "waterpenny" [setxy 55 19]
      if shape = "gilledsnail" [setxy 65 19]
      if shape = "dobsonfly" [setxy 75 19]
      if shape = "cranefly" [setxy 85 19]
      if shape = "dragonfly" [setxy 15 9]
      if shape = "crawdad" [setxy 25 9]
      if shape = "sowbug" [setxy 35 9]
      if shape = "worm" [setxy 45 9]
      if shape = "blackfly" [setxy 55 9]
      if shape = "midge" [setxy 65 9]
      if shape = "leech" [setxy 75 9]
      if shape = "lungedsnail" [setxy 85 9]
    ]
  ]
end 

to update
   ifelse count critter with [shape = "caddisfly" and ycor < 24] > 0 [set s1 1] [set s1 0]
   ifelse count critter with [shape = "mayfly" and ycor < 24] > 0 [set s2 1] [set s2 0]
   ifelse count critter with [shape = "stonefly" and ycor < 24] > 0 [set s3 1] [set s3 0]
   ifelse count critter with [shape = "rifflebeetle" and ycor < 24] > 0 [set s4 1] [set s4 0]
   ifelse count critter with [shape = "waterpenny" and ycor < 24] > 0 [set s5 1] [set s5 0]
   ifelse count critter with [shape = "gilledsnail" and ycor < 24] > 0 [set s6 1] [set s6 0]
   ifelse count critter with [shape = "dobsonfly" and ycor < 24] > 0 [set s7 1] [set s7 0]
   ifelse count critter with [shape = "cranefly" and ycor < 24] > 0 [set s8 1] [set s8 0]
   ifelse count critter with [shape = "dragonfly" and ycor < 24] > 0 [set s9 1] [set s9 0]
   ifelse count critter with [shape = "crawdad" and ycor < 24] > 0 [set s10 1] [set s10 0]
   ifelse count critter with [shape = "sowbug" and ycor < 24] > 0 [set s11 1] [set s11 0]
   ifelse count critter with [shape = "worm" and ycor < 24] > 0 [set s12 1] [set s12 0]
   ifelse count critter with [shape = "blackfly" and ycor < 24] > 0 [set s13 1] [set s13 0]
   ifelse count critter with [shape = "midge" and ycor < 24] > 0 [set s14 1] [set s14 0]
   ifelse count critter with [shape = "leech" and ycor < 24] > 0 [set s15 1] [set s15 0]
   ifelse count critter with [shape = "lungedsnail" and ycor < 24] > 0 [set s16 1] [set s16 0]
   set sTot s1 + S2 + s3 + s4 + s4 + s5 + s6 + s7 + s8 + s9 + s10 + s11 + s12 + s13 + s14 + s15 + s16
end 

to open
  ask seine [die]
  create-seine 1
  [
    set shape "seine"
    set size 15
    set xcor 50 set ycor 40
  ]
  set catchem 1
  set sttime 1
end 

to Close
  ask Seine [die]
  set catchem 0
  set sttime 0
end 

to release
  plot-pen-up
  ask critter
  [ if ycor < 24 [setxy 40 45]]
  set time 0
  set stot 0
  do-plots
  plot-pen-down
end 

to do-plots
  set-current-plot "Cumulative Species"
  set-current-plot-pen "Total"
  plotxy time sTot
end 

to show-species-count
  let caddisfly-count count critter with [shape = "caddisfly" and ycor < 24]
  let mayfly-count count critter with [shape = "mayfly" and ycor < 24]
  let stonefly-count count critter with [shape = "stonefly" and ycor < 24]
  let rifflebeetle-count count critter with [shape = "rifflebeetle" and ycor < 24]
  let waterpenny-count count critter with [shape = "waterpenny" and ycor < 24]
  let gilledsnail-count count critter with [shape = "gilledsnail" and ycor < 24]
  let dobsonfly-count count critter with [shape = "dobsonfly" and ycor < 24]
  let cranefly-count count critter with [shape = "cranefly" and ycor < 24]
  let dragonfly-count count critter with [shape = "dragonfly" and ycor < 24]
  let crawdad-count count critter with [shape = "crawdad" and ycor < 24]
  let sowbug-count count critter with [shape = "sowbug" and ycor < 24]
  let worm-count count critter with [shape = "worm" and ycor < 24]
  let blackfly-count count critter with [shape = "blackfly" and ycor < 24]
  let midge-count count critter with [shape = "midge" and ycor < 24]
  let leech-count count critter with [shape = "leech" and ycor < 24]
  let lungedsnail-count count critter with [shape = "lungedsnail" and ycor < 24]

  print (caddisfly-count)
  print (mayfly-count)
  print (stonefly-count)
  print (rifflebeetle-count)
  print (waterpenny-count)
  print (gilledsnail-count)
  print (dobsonfly-count)
  print (cranefly-count)
  print (dragonfly-count)
  print (crawdad-count)
  print (sowbug-count)
  print (worm-count)
  print (blackfly-count)
  print (midge-count)
  print (leech-count)
  print (lungedsnail-count)
end 

to display-species-count
  show-species-count
end 





There are 7 versions of this model.

Uploaded by When Description Download
Bella Fassett 11 months ago format Download this version
Bella Fassett 11 months ago format data Download this version
Bella Fassett 11 months ago x Download this version
Bella Fassett 11 months ago formatting Download this version
Bella Fassett 11 months ago fix pop up format Download this version
Bella Fassett 11 months ago fixed popup counts Download this version
Bella Fassett 11 months ago Initial upload Download this version

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